While it is true that the Institute may not ethically be the best faction and that their leaders are flawed, a change in leadership is a more sensible and effective solution to this problem than blowing up the Institute with a nuclear explosion and causing severe damage to a highly populated area of the Commonwealth in the process.
The Sole Survivor's connection with Father in addition to the fact that there are already scientists within the Institute who would favor the Institute helping the people of the Commonwealth (e.g. Dr. Li and Dr. Karlin), means that turning the Institute around is not really that far fetched.
And then there is the argument about synths. Synths are androids, or biological robots; robots designed to look and act like…
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