So, I found out on No Mutants Allowed! that there's actually another criteria required to make the Followers take control of the LA Boneyard. The Vault Dweller had to "teach them the ways of war", which'd involve teaching of fighting (at least when needed, since the Followers need to protect themselves) with knives to using weaponry. Killing the spy for the Children of the Cathedral, Heather, wouldn't be enough.
I had also found out that the "Hub prospers" ending which couldn't be obtained despite the restoration of the quest to Report Iguana Bob to the Hub police, there was another criteria only known as "Be kind to Harold"... Giving the poor mutant some caps doesn't do shit, so I had to manually edit a save to activate the global variable. Thank you guys, I do appreciate clearing things up even though it gets tiresome when you have schoolwork and driving lessons to deal with later. --Breakin'Benny (talk) 12:16, April 28, 2014 (UTC)